Tropomiozinska receptorska kinaza B

NTRK2
Available structures
PDBPretraga ortologa: PDBe RCSB
List of PDB id codes

4AT5, 1HCF, 1WWB, 2MFQ, 4ASZ, 4AT3, 4AT4

Identifikatori
AlijasiNTRK2
Spoljašnji IDOMIM: 600456 MGI: 97384 HomoloGene: 4504 GeneCards: NTRK2
Genska lokacija (miš)
Chromosome 13 (mouse)
Hr.Chromosome 13 (mouse)[1]
Chromosome 13 (mouse)
Genomska lokacija za NTRK2
Genomska lokacija za NTRK2
Band13 B1|13 31.2 cMStart58,954,383 bp[1]
Kraj59,281,784 bp[1]
Obrazac RNK izražavanja




More reference expression data
Genska ontologija
Molecular function neurotrophin binding
neurotrophin receptor activity
kinase activity
transmembrane receptor protein tyrosine kinase activity
ATP binding
protein kinase activity
brain-derived neurotrophic factor binding
transferase activity
protein homodimerization activity
protein tyrosine kinase activity
nucleotide binding
brain-derived neurotrophic factor-activated receptor activity
GO:0001948, GO:0016582 везивање за протеине плазме
Receptor tirozinska kinaza
transmembrane signaling receptor activity
Cellular component цитосол
Endozom
postsynaptic membrane
мембрана
terminal bouton
саставни део мембране
receptor complex
endosome membrane
integral component of plasma membrane
GO:0097483, GO:0097481 постсинаптичка густина
early endosome
early endosome membrane
ћелијска мембрана
аксон
дендрит
окоједарна област цитоплазме
цитоплазма
cell projection
dendritic spine
axon terminus
Golgi membrane
Biological process GO:1904089 негативно уређење неурона процеса апоптозе
peripheral nervous system neuron development
positive regulation of protein phosphorylation
oligodendrocyte differentiation
учење
positive regulation of axonogenesis
Васкулогенеза
protein phosphorylation
central nervous system neuron development
neuromuscular junction development
retinal rod cell development
биолошки часовник
feeding behavior
GO:0043087, GO:0032313, GO:0032319, GO:0032314, GO:0043088 regulation of GTPase activity
positive regulation of peptidyl-serine phosphorylation
brain-derived neurotrophic factor receptor signaling pathway
regulation of protein kinase B signaling
уређење метаболичких процеса
positive regulation of MAPK cascade
диференцијација
Fosforilacija
neuron migration
mechanoreceptor differentiation
ментални развој
glutamate secretion
retina development in camera-type eye
neuron differentiation
cerebral cortex development
negative regulation of anoikis
multicellular organism development
GO:1901313 positive regulation of gene expression
positive regulation of cell population proliferation
positive regulation of neuron projection development
cellular response to amino acid stimulus
positive regulation of phosphatidylinositol 3-kinase signaling
peptidyl-tyrosine phosphorylation
long-term potentiation
positive regulation of synapse assembly
transmembrane receptor protein tyrosine kinase signaling pathway
protein autophosphorylation
trans-synaptic signaling by neuropeptide, modulating synaptic transmission
activation of phospholipase C activity
neurotrophin TRK receptor signaling pathway
positive regulation of non-membrane spanning protein tyrosine kinase activity
trans-synaptic signaling by BDNF, modulating synaptic transmission
negative regulation of signal transduction
neuronal action potential propagation
myelination in peripheral nervous system
негативно регулисање апоптотичког процеса
positive regulation of ERK1 and ERK2 cascade
cellular response to nerve growth factor stimulus
regulation of MAPK cascade
cellular response to brain-derived neurotrophic factor stimulus
Sources:Amigo / QuickGO
Ortolozi
VrsteČovekMiš
Entrez

4915

18212

Ensembl

ENSG00000148053

ENSMUSG00000055254

UniProt

Q16620

P15209

RefSeq (mRNA)
NM_001007097
NM_001018064
NM_001018065
NM_001018066
NM_001291937

NM_006180

NM_001025074
NM_008745
NM_001282961

RefSeq (protein)
NP_001007098
NP_001018074
NP_001018075
NP_001018076
NP_001278866

NP_006171
NP_001356461
NP_001356462
NP_001356463
NP_001356464
NP_001356465
NP_001356466
NP_001356467
NP_001356468
NP_001356469
NP_001356470
NP_001356471
NP_001356472
NP_001356473
NP_001356474
NP_001356475
NP_001356476
NP_001356477
NP_001356478
NP_001356479
NP_001356480
NP_001356481

NP_001020245
NP_001269890
NP_032771

Location (UCSC)n/aChr 13: 58.95 – 59.28 Mb
PubMed search[2][3]
Wikidata
View/Edit HumanView/Edit Mouse

TrkB receptor (TrkB tirozinska kinaza, receptor BDNF/NT-3 faktora rasta, receptorska neurotrofna tirozinska kinaza, tip 2) protein je koji je kod ljudi kodiran NTRK2 genom.[4][5]

Interakcije

TrkB formira interakcije sa:

Ligandi

Agonisti

Vidi još

Reference

  1. ^ а б в GRCm38: Ensembl release 89: ENSMUSG00000055254 - Ensembl, May 2017
  2. ^ „Human PubMed Reference:”. National Center for Biotechnology Information, U.S. National Library of Medicine. 
  3. ^ „Mouse PubMed Reference:”. National Center for Biotechnology Information, U.S. National Library of Medicine. 
  4. ^ Malenka RC, Nestler EJ, Hyman SE (2009). „Chapter 8: Atypical neurotransmitters”. Ур.: Sydor A, Brown RY. Molecular Neuropharmacology: A Foundation for Clinical Neuroscience (2nd изд.). New York: McGraw-Hill Medical. стр. —. ISBN 9780071481274. 
  5. ^ Nakagawara A, Liu XG, Ikegaki N, White PS, Yamashiro DJ, Nycum LM, Biegel JA, Brodeur GM (1995). „Cloning and chromosomal localization of the human TRK-B tyrosine kinase receptor gene (NTRK2)”. Genomics. 25 (2): 538—46. PMID 7789988. doi:10.1016/0888-7543(95)80055-Q. 
  6. ^ Haniu M, Montestruque S, Bures EJ, Talvenheimo J, Toso R, Lewis-Sandy S, Welcher AA, Rohde MF (1997). „Interactions between brain-derived neurotrophic factor and the TRKB receptor. Identification of two ligand binding domains in soluble TRKB by affinity separation and chemical cross-linking”. J. Biol. Chem. 272 (40): 25296—303. PMID 9312147. doi:10.1074/jbc.272.40.25296. 
  7. ^ Naylor RL, Robertson AG, Allen SJ, Sessions RB, Clarke AR, Mason GG, Burston JJ, Tyler SJ, Wilcock GK, Dawbarn D (2002). „A discrete domain of the human TrkB receptor defines the binding sites for BDNF and NT-4”. Biochem. Biophys. Res. Commun. 291 (3): 501—7. PMID 11855816. doi:10.1006/bbrc.2002.6468. 
  8. ^ Iwasaki Y, Gay B, Wada K, Koizumi S (1998). „Association of the Src family tyrosine kinase Fyn with TrkB”. J. Neurochem. 71 (1): 106—11. PMID 9648856. doi:10.1046/j.1471-4159.1998.71010106.x. 
  9. ^ а б в Suzuki S, Mizutani M, Suzuki K, Yamada M, Kojima M, Hatanaka H, Koizumi S (2002). „Brain-derived neurotrophic factor promotes interaction of the Nck2 adaptor protein with the TrkB tyrosine kinase receptor”. Biochem. Biophys. Res. Commun. 294 (5): 1087—92. PMID 12074588. doi:10.1016/S0006-291X(02)00606-X. 
  10. ^ Meakin SO, MacDonald JI, Gryz EA, Kubu CJ, Verdi JM (1999). „The signaling adapter FRS-2 competes with Shc for binding to the nerve growth factor receptor TrkA. A model for discriminating proliferation and differentiation”. J. Biol. Chem. 274 (14): 9861—70. PMID 10092678. doi:10.1074/jbc.274.14.9861. 
  11. ^ Geetha T, Wooten MW (2003). „Association of the atypical protein kinase C-interacting protein p62/ZIP with nerve growth factor receptor TrkA regulates receptor trafficking and Erk5 signaling”. J. Biol. Chem. 278 (7): 4730—9. PMID 12471037. doi:10.1074/jbc.M208468200. 
  12. ^ Nakamura T, Muraoka S, Sanokawa R, Mori N (1998). „N-Shc and Sck, two neuronally expressed Shc adapter homologs. Their differential regional expression in the brain and roles in neurotrophin and Src signaling”. J. Biol. Chem. 273 (12): 6960—7. PMID 9507002. doi:10.1074/jbc.273.12.6960. 
  13. ^ Jang SW, Liu X, Chan CB, Weinshenker D, Hall RA, Xiao G, Ye K (2009). „Amitriptyline is a TrkA and TrkB receptor agonist that promotes TrkA/TrkB heterodimerization and has potent neurotrophic activity”. Chem. Biol. 16 (6): 644—56. PMC 2844702 Слободан приступ. PMID 19549602. doi:10.1016/j.chembiol.2009.05.010. 
  14. ^ Liu X, Chan CB, Jang SW, Pradoldej S, Huang J, He K, Phun LH, France S, Xiao G, Jia Y, Luo HR, Ye K (2010). „A Synthetic 7,8-Dihydroxyflavone Derivative Promotes Neurogenesis and Exhibits Potent Antidepressant Effect”. J Med Chem. 53: 8274. PMID 21073191. doi:10.1021/jm101206p. 
  15. ^ {{Cite http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0011528 }}

Literatura

  • Klein R, Conway D, Parada LF, Barbacid M (1990). „The trkB tyrosine protein kinase gene codes for a second neurogenic receptor that lacks the catalytic kinase domain”. Cell. 61 (4): 647—56. PMID 2160854. doi:10.1016/0092-8674(90)90476-U. 
  • Squinto SP, Stitt TN, Aldrich TH, Davis S, Bianco SM, Radziejewski C, Glass DJ, Masiakowski P, Furth ME, Valenzuela DM (1991). „trkB encodes a functional receptor for brain-derived neurotrophic factor and neurotrophin-3 but not nerve growth factor”. Cell. 65 (5): 885—93. PMID 1710174. doi:10.1016/0092-8674(91)90395-F. 
  • Rose CR, Blum R, Pichler B, Lepier A, Kafitz KW, Konnerth A (2003). „Truncated TrkB-T1 mediates neurotrophin-evoked calcium signalling in glia cells”. Nature. 426 (6962): 74—8. PMID 14603320. doi:10.1038/nature01983. 
  • Ohira K, Kumanogoh H, Sahara Y, Homma KJ, Hirai H, Nakamura S, Hayashi M (2005). „A truncated tropomyosin-related kinase B receptor, T1, regulates glial cell morphology via Rho GDP dissociation inhibitor 1”. J. Neurosci. 25 (6): 1343—53. PMID 15703388. doi:10.1523/JNEUROSCI.4436-04.2005. 
  • Yamada K, Nabeshima T (2003). „Brain-derived neurotrophic factor/TrkB signaling in memory processes”. J. Pharmacol. Sci. 91 (4): 267—70. PMID 12719654. doi:10.1254/jphs.91.267. 
  • Soppet D, Escandon E, Maragos J, Middlemas DS, Reid SW, Blair J, Burton LE, Stanton BR, Kaplan DR, Hunter T, Nikolics K, Parada LF (1991). „The neurotrophic factors brain-derived neurotrophic factor and neurotrophin-3 are ligands for the trkB tyrosine kinase receptor”. Cell. 65 (5): 895—903. PMID 1645620. doi:10.1016/0092-8674(91)90396-G. 
  • Squinto SP, Stitt TN, Aldrich TH, Davis S, Bianco SM, Radziejewski C, Glass DJ, Masiakowski P, Furth ME, Valenzuela DM (1991). „trkB encodes a functional receptor for brain-derived neurotrophic factor and neurotrophin-3 but not nerve growth factor”. Cell. 65 (5): 885—93. PMID 1710174. doi:10.1016/0092-8674(91)90395-F. 
  • Haniu M, Talvenheimo J, Le J, Katta V, Welcher A, Rohde MF (1995). „Extracellular domain of neurotrophin receptor trkB: disulfide structure, N-glycosylation sites, and ligand binding”. Arch. Biochem. Biophys. 322 (1): 256—64. PMID 7574684. doi:10.1006/abbi.1995.1460. 
  • Ip NY, Stitt TN, Tapley P, Klein R, Glass DJ, Fandl J, Greene LA, Barbacid M, Yancopoulos GD (1993). „Similarities and differences in the way neurotrophins interact with the Trk receptors in neuronal and nonneuronal cells”. Neuron. 10 (2): 137—49. PMID 7679912. doi:10.1016/0896-6273(93)90306-C. 
  • Slaugenhaupt SA, Blumenfeld A, Liebert CB, Mull J, Lucente DE, Monahan M, Breakefield XO, Maayan C, Parada L, Axelrod FB (1995). „The human gene for neurotrophic tyrosine kinase receptor type 2 (NTRK2) is located on chromosome 9 but is not the familial dysautonomia gene”. Genomics. 25 (3): 730—2. PMID 7759111. doi:10.1016/0888-7543(95)80019-I. 
  • Shelton DL, Sutherland J, Gripp J, Camerato T, Armanini MP, Phillips HS, Carroll K, Spencer SD, Levinson AD (1995). „Human trks: molecular cloning, tissue distribution, and expression of extracellular domain immunoadhesins”. J. Neurosci. 15 (1 Pt 2): 477—91. PMID 7823156. 
  • Allen SJ, Dawbarn D, Eckford SD, Wilcock GK, Ashcroft M, Colebrook SM, Feeney R, MacGowan SH (1994). „Cloning of a non-catalytic form of human trkB and distribution of messenger RNA for trkB in human brain”. Neuroscience. 60 (3): 825—34. PMID 7936202. doi:10.1016/0306-4522(94)90507-X. 
  • Rydén M, Ibáñez CF (1996). „Binding of neurotrophin-3 to p75LNGFR, TrkA, and TrkB mediated by a single functional epitope distinct from that recognized by trkC”. J. Biol. Chem. 271 (10): 5623—7. PMID 8621424. doi:10.1074/jbc.271.10.5623. 
  • Yamamoto M, Sobue G, Yamamoto K, Terao S, Mitsuma T (1996). „Expression of mRNAs for neurotrophic factors (NGF, BDNF, NT-3, and GDNF) and their receptors (p75NGFR, trkA, trkB, and trkC) in the adult human peripheral nervous system and nonneural tissues”. Neurochem. Res. 21 (8): 929—38. PMID 8895847. doi:10.1007/BF02532343. 
  • Valent A, Danglot G, Bernheim A (1997). „Mapping of the tyrosine kinase receptors trkA (NTRK1), trkB (NTRK2) and trkC(NTRK3) to human chromosomes 1q22, 9q22 and 15q25 by fluorescence in situ hybridization”. Eur. J. Hum. Genet. 5 (2): 102—4. PMID 9195161. 
  • Haniu M, Montestruque S, Bures EJ, Talvenheimo J, Toso R, Lewis-Sandy S, Welcher AA, Rohde MF (1997). „Interactions between brain-derived neurotrophic factor and the TRKB receptor. Identification of two ligand binding domains in soluble TRKB by affinity separation and chemical cross-linking”. J. Biol. Chem. 272 (40): 25296—303. PMID 9312147. doi:10.1074/jbc.272.40.25296. 
  • Nakamura T, Muraoka S, Sanokawa R, Mori N (1998). „N-Shc and Sck, two neuronally expressed Shc adapter homologs. Their differential regional expression in the brain and roles in neurotrophin and Src signaling”. J. Biol. Chem. 273 (12): 6960—7. PMID 9507002. doi:10.1074/jbc.273.12.6960. 
  • Hackett SF, Friedman Z, Freund J, Schoenfeld C, Curtis R, DiStefano PS, Campochiaro PA (1998). „A splice variant of trkB and brain-derived neurotrophic factor are co-expressed in retinal pigmented epithelial cells and promote differentiated characteristics”. Brain Res. 789 (2): 201—12. PMID 9573364. doi:10.1016/S0006-8993(97)01440-6. 
  • Iwasaki Y, Gay B, Wada K, Koizumi S (1998). „Association of the Src family tyrosine kinase Fyn with TrkB”. J. Neurochem. 71 (1): 106—11. PMID 9648856. doi:10.1046/j.1471-4159.1998.71010106.x. 
  • Qian X, Riccio A, Zhang Y, Ginty DD (1998). „Identification and characterization of novel substrates of Trk receptors in developing neurons”. Neuron. 21 (5): 1017—29. PMID 9856458. doi:10.1016/S0896-6273(00)80620-0. 
  • Bibel M, Hoppe E, Barde YA (1999). „Biochemical and functional interactions between the neurotrophin receptors trk and p75NTR”. EMBO J. 18 (3): 616—22. PMC 1171154 Слободан приступ. PMID 9927421. doi:10.1093/emboj/18.3.616. 
  • Yamada M, Ohnishi H, Sano S, Araki T, Nakatani A, Ikeuchi T, Hatanaka H (1999). „Brain-derived neurotrophic factor stimulates interactions of Shp2 with phosphatidylinositol 3-kinase and Grb2 in cultured cerebral cortical neurons”. J. Neurochem. 73 (1): 41—9. PMID 10386953. doi:10.1046/j.1471-4159.1999.0730041.x. 
  • Ultsch MH, Wiesmann C, Simmons LC, Henrich J, Yang M, Reilly D, Bass SH, de Vos AM (1999). „Crystal structures of the neurotrophin-binding domain of TrkA, TrkB and TrkC”. J. Mol. Biol. 290 (1): 149—59. PMID 10388563. doi:10.1006/jmbi.1999.2816. 

Spoljašnje veze

  • Memories are made of this molecule - New Scientist, 15 January 2007.
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PDB Galerija
  • 1hcf​: Kristalna struktura TRKB-D5 vezanog za neurotrofin-4/5
    1hcf: Kristalna struktura TRKB-D5 vezanog za neurotrofin-4/5
  • 1wwb​: Domen vezivanja liganda ljudskog TRKB receptora
    1wwb: Domen vezivanja liganda ljudskog TRKB receptora
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EGF receptorska familija
EGFR • ERBB2 • ERBB3 • ERBB4
Insulin receptor familija
IGF1R • INSR • INSRR
PDGF receptor familija
CSF1R • FLT3 • KIT • PDGFR (PDGFRA, PDGFRB)
FGF receptor familija
FGFR1 • FGFR2 • FGFR3 • FGFR4
VEGF receptor familija
VEGFR1 • VEGFR2 • VEGFR3 • VEGFR4
HGF receptor familija
MET • RON
Trk receptor familija
NTRK1 • NTRK2 • NTRK3
EPH receptor familija
EPHA1 • EPHA2 • EPHA3 • EPHA4 • EPHA5 • EPHA6 • EPHA7 • EPHA8 • EPHB1 • EPHB2 • EPHB3 • EPHB4 • EPHB5 • EPHB6 • EPHX
LTK receptor familija
LTK • ALK
TIE receptor familija
TIE • TEK
ROR receptor familija
ROR1 • ROR2
DDR receptor familija
DDR1 • DDR2
PTK7 receptor familija
RYK receptor familija
RYK
MuSK receptor familija
ROS receptor familija
ROS1
AATYK receptor familija
AATYK • AATYK2 • AATYK3
AXL receptor familija
AXL • MER • TYRO3
RET receptor familija
RET
nekategorisani
STYK1
ABL familija
ABL1 • ARG
ACK familija
ACK1 • TNK1
CSK familija
CSK • MATK
FAK familija
FAK • PYK2
FES familija
FES • FER
FRK familija
FRK • BRK • SRMS
JAK familija
JAK1 • JAK2 • JAK3 • TYK2
SRC-A familija
SRC • FGR • FYN • YES1
SRC-B familija
BLK • HCK • LCK • LYN
TEC familija
TEC • BMX • BTK • ITK • TXK
SYK familija
SYK • ZAP70
B enzm: 1.1/2/3/4/5/6/7/8/10/11/13/14/15-18, 2.1/2/3/4/5/6/7/8, 2.7.10, 2.7.11-12, 3.1/2/3/4/5/6/7, 3.1.3.48, 3.4.21/22/23/24, 4.1/2/3/4/5/6, 5.1/2/3/4/99, 6.1-3/4/5-6
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Nervni faktori rasta
niski afinitet/p75 – visok afinitet Trk (TrkA, TrkB, TrkC) – Cilijarni neurotrofni faktor
Somatomedin
CSF
Stem ćelijski faktor – Eritropoietin
TGF put
TGF-beta (1, 2) – Aktivin (1, 2) – Bone morfogenetski protein (1, 2)
Drugi
Hepatocitni faktor rastaErbB/Epidermalni faktor rastaFibroblast faktor rasta (1, 2, 3, 4) – Trombocit-izvedeni faktor rasta (A, B) – VEGF (1, 2, 3)
vidi isto Faktori rasta